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Bob Eisenberg

TitleProfessor
InstitutionRush University, Rush Medical College
DepartmentPhysiology and Biophysics
Address
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    Collapse Overview 
    Collapse overview
    My Scopus ID is 7102490928.
    My NIH COMMONS name is BEISENBE.


    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Liu JL, Eisenberg B. Numerical methods for a Poisson-Nernst-Planck-Fermi model of biological ion channels. Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Jul; 92(1):012711. PMID: 26274207.
      View in: PubMed
    2. Liu JL, Eisenberg B. Poisson-Nernst-Planck-Fermi theory for modeling biological ion channels. J Chem Phys. 2014 Dec 14; 141(22):22D532. PMID: 25494803.
      View in: PubMed
    3. Liu JL, Eisenberg B. Analytical models of calcium binding in a calcium channel. J Chem Phys. 2014 Aug 21; 141(7):075102. PMID: 25149816.
      View in: PubMed
    4. Dreyer J, Strodel P, Ippoliti E, Finnerty J, Eisenberg B, Carloni P. Ion permeation in the NanC porin from Escherichia coli: free energy calculations along pathways identified by coarse-grain simulations. J Phys Chem B. 2013 Oct 31; 117(43):13534-42. PMID: 24147565.
      View in: PubMed
    5. Eisenberg B. Interacting ions in biophysics: real is not ideal. Biophys J. 2013 May 07; 104(9):1849-66. PMID: 23663828; PMCID: PMC3647150.
    6. Eisenberg B. Ionic interactions in biological and physical systems: a variational treatment. Faraday Discuss. 2013; 160:279-96; discussion 311-27. PMID: 23795506.
      View in: PubMed
    7. Eisenberg B. Ionic interactions are everywhere. Physiology (Bethesda). 2013 Jan; 28(1):28-38. PMID: 23280355.
      View in: PubMed
    8. Horng TL, Lin TC, Liu C, Eisenberg B. PNP equations with steric effects: a model of ion flow through channels. J Phys Chem B. 2012 Sep 20; 116(37):11422-41. PMID: 22900604.
      View in: PubMed
    9. Jimenez-Morales D, Liang J, Eisenberg B. Ionizable side chains at catalytic active sites of enzymes. Eur Biophys J. 2012 May; 41(5):449-60. PMID: 22484856; PMCID: PMC3360948.
    10. Giri J, Tang JM, Wirth C, Peneff CM, Eisenberg B. Single-channel measurements of an N-acetylneuraminic acid-inducible outer membrane channel in Escherichia coli. Eur Biophys J. 2012 Mar; 41(3):259-71. PMID: 22246445; PMCID: PMC3288477.
    11. Boda D, Henderson D, Eisenberg B, Gillespie D. A method for treating the passage of a charged hard sphere ion as it passes through a sharp dielectric boundary. J Chem Phys. 2011 Aug 14; 135(6):064105. PMID: 21842924; PMCID: PMC3170393.
    12. Eisenberg B. Mass Action in Ionic Solutions. Chem Phys Lett. 2011 Jul 26; 511(1-3):1-6. PMID: 21799541.
      View in: PubMed
    13. Krauss D, Eisenberg B, Gillespie D. Selectivity sequences in a model calcium channel: role of electrostatic field strength. Eur Biophys J. 2011 Jun; 40(6):775-82. PMID: 21380773; PMCID: PMC3124256.
    14. Boda D, Giri J, Henderson D, Eisenberg B, Gillespie D. Analyzing the components of the free-energy landscape in a calcium selective ion channel by Widom's particle insertion method. J Chem Phys. 2011 Feb 07; 134(5):055102. PMID: 21303162; PMCID: PMC3045419.
    15. Giri J, Fonseca JE, Boda D, Henderson D, Eisenberg B. Self-organized models of selectivity in calcium channels. Phys Biol. 2011 Apr; 8(2):026004. PMID: 21263167.
      View in: PubMed
    16. Eisenberg B. Multiple Scales in the Simulation of Ion Channels and Proteins. J Phys Chem C Nanomater Interfaces. 2010 Oct 21; 114(48):20719-20733. PMID: 21135913.
      View in: PubMed
    17. Eisenberg B, Hyon Y, Liu C. Energy variational analysis of ions in water and channels: Field theory for primitive models of complex ionic fluids. J Chem Phys. 2010 Sep 14; 133(10):104104. PMID: 20849161; PMCID: PMC2949347.
    18. Zhang C, Raugei S, Eisenberg B, Carloni P. Molecular Dynamics in Physiological Solutions: Force Fields, Alkali Metal Ions, and Ionic Strength. J Chem Theory Comput. 2010 Jul 13; 6(7):2167-75. PMID: 26615943.
      View in: PubMed
    19. Malasics A, Gillespie D, Nonner W, Henderson D, Eisenberg B, Boda D. Protein structure and ionic selectivity in calcium channels: selectivity filter size, not shape, matters. Biochim Biophys Acta. 2009 Dec; 1788(12):2471-80. PMID: 19818330; PMCID: PMC2789594.
    20. Boda D, Valiskó M, Henderson D, Eisenberg B, Gillespie D, Nonner W. Ionic selectivity in L-type calcium channels by electrostatics and hard-core repulsion. J Gen Physiol. 2009 May; 133(5):497-509. PMID: 19398776; PMCID: PMC2712969.
    21. Boda D, Valiskó M, Henderson D, Gillespie D, Eisenberg B, Gilson MK. Ions and inhibitors in the binding site of HIV protease: comparison of Monte Carlo simulations and the linearized Poisson-Boltzmann theory. Biophys J. 2009 Feb 18; 96(4):1293-306. PMID: 19217848; PMCID: PMC2717253.
    22. Eisenberg B. Engineering channels: atomic biology. Proc Natl Acad Sci U S A. 2008 Apr 29; 105(17):6211-2. PMID: 18443300; PMCID: PMC2359799.
    23. Boda D, Nonner W, Henderson D, Eisenberg B, Gillespie D. Volume exclusion in calcium selective channels. Biophys J. 2008 May 01; 94(9):3486-96. PMID: 18199663; PMCID: PMC2292364.
    24. Miedema H, Vrouenraets M, Wierenga J, Meijberg W, Robillard G, Eisenberg B. A biological porin engineered into a molecular, nanofluidic diode. Nano Lett. 2007 Sep; 7(9):2886-91. PMID: 17691852.
      View in: PubMed
    25. Boda D, Nonner W, Valiskó M, Henderson D, Eisenberg B, Gillespie D. Steric selectivity in Na channels arising from protein polarization and mobile side chains. Biophys J. 2007 Sep 15; 93(6):1960-80. PMID: 17526571; PMCID: PMC1959557.
    26. Boda D, Valiskó M, Eisenberg B, Nonner W, Henderson D, Gillespie D. Combined effect of pore radius and protein dielectric coefficient on the selectivity of a calcium channel. Phys Rev Lett. 2007 Apr 20; 98(16):168102. PMID: 17501467.
      View in: PubMed
    27. Wilk SJ, Petrossian L, Goryll M, Thornton TJ, Goodnick SM, Tang JM, Eisenberg RS. Integrated electrodes on a silicon based ion channel measurement platform. Biosens Bioelectron. 2007 Sep 30; 23(2):183-90. PMID: 17507211.
      View in: PubMed
    28. Eisenberg B. Mechanical spikes from nerve terminals. Biophys J. 2007 May 01; 92(9):2983. PMID: 17307819; PMCID: PMC1852345.
    29. Miedema H, Vrouenraets M, Wierenga J, Gillespie D, Eisenberg B, Meijberg W, Nonner W. Ca2+ selectivity of a chemically modified OmpF with reduced pore volume. Biophys J. 2006 Dec 15; 91(12):4392-400. PMID: 16997866; PMCID: PMC1779923.
    30. Boda D, Valiskó M, Eisenberg B, Nonner W, Henderson D, Gillespie D. The effect of protein dielectric coefficient on the ionic selectivity of a calcium channel. J Chem Phys. 2006 Jul 21; 125(3):34901. PMID: 16863379.
      View in: PubMed
    31. Miedema H, Vrouenraets M, Wierenga J, Eisenberg B, Schirmer T, Baslé A, Meijberg W. Conductance and selectivity fluctuations in D127 mutants of the bacterial porin OmpF. Eur Biophys J. 2006 Dec; 36(1):13-22. PMID: 16858566.
      View in: PubMed
    32. Nonner W, Peyser A, Gillespie D, Eisenberg B. Relating microscopic charge movement to macroscopic currents: the Ramo-Shockley theorem applied to ion channels. Biophys J. 2004 Dec; 87(6):3716-22. PMID: 15465857; PMCID: PMC1304885.
    33. Miedema H, Meter-Arkema A, Wierenga J, Tang J, Eisenberg B, Nonner W, Hektor H, Gillespie D, Meijberg W. Permeation properties of an engineered bacterial OmpF porin containing the EEEE-locus of Ca2+ channels. Biophys J. 2004 Nov; 87(5):3137-47. PMID: 15326033; PMCID: PMC1304784.
    34. Boda D, Gillespie D, Nonner W, Henderson D, Eisenberg B. Computing induced charges in inhomogeneous dielectric media: application in a Monte Carlo simulation of complex ionic systems. Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Apr; 69(4 Pt 2):046702. PMID: 15169126.
      View in: PubMed
    35. Eisenberg B. Why can't protons move through water channels? Biophys J. 2003 Dec; 85(6):3427-8. PMID: 14645038; PMCID: PMC1303650.
    36. Tang JM, Wang J, Eisenberg RS. Perfusing patch pipettes. Methods Enzymol. 1992; 207:176-81. PMID: 1528117.
      View in: PubMed
    37. Tang JM, Wang J, Eisenberg RS. Studies on intact sarcoplasmic reticulum: patch clamp recording and tension measurement in lobster split muscle fibers. Methods Enzymol. 1992; 207:692-9. PMID: 1382208.
      View in: PubMed
    38. Eisenberg BR, Goldspink PH, Wenderoth MP. Distribution of myosin heavy chain mRNA in normal and hyperthyroid heart. J Mol Cell Cardiol. 1991 Mar; 23(3):287-96. PMID: 1880813.
      View in: PubMed
    39. Dix DJ, Eisenberg BR. Distribution of myosin mRNA during development and regeneration of skeletal muscle fibers. Dev Biol. 1991 Feb; 143(2):422-6. PMID: 1991564.
      View in: PubMed
    40. Dix DJ, Eisenberg BR. Redistribution of myosin heavy chain mRNA in the midregion of stretched muscle fibers. Cell Tissue Res. 1991 Jan; 263(1):61-9. PMID: 2009553.
      View in: PubMed
    41. Dix DJ, Eisenberg BR. Myosin mRNA accumulation and myofibrillogenesis at the myotendinous junction of stretched muscle fibers. J Cell Biol. 1990 Nov; 111(5 Pt 1):1885-94. PMID: 2229178; PMCID: PMC2116343.
    42. Tang JM, Wang J, Quandt FN, Eisenberg RS. Perfusing pipettes. Pflugers Arch. 1990 May; 416(3):347-50. PMID: 2381768.
      View in: PubMed
    43. Tang JM, Wang J, Eisenberg RS. K+-selective channel from sarcoplasmic reticulum of split lobster muscle fibers. J Gen Physiol. 1989 Aug; 94(2):261-78. PMID: 2794967; PMCID: PMC2228942.
    44. Lin ZY, Wenderoth MP, Eisenberg BR. Individual rabbit cardiac myocytes have different thresholds for alpha myosin heavy chain regulation by thyroid hormone. Am J Anat. 1989 Aug; 185(4):455-61. PMID: 2782285.
      View in: PubMed
    45. Dix DJ, Eisenberg BR. In situ hybridization and immunocytochemistry in serial sections of rabbit skeletal muscle to detect myosin expression. J Histochem Cytochem. 1988 Dec; 36(12):1519-26. PMID: 3057072.
      View in: PubMed
    46. Kennedy JM, Eisenberg BR, Reid SK, Sweeney LJ, Zak R. Nascent muscle fiber appearance in overloaded chicken slow-tonic muscle. Am J Anat. 1988 Feb; 181(2):203-15. PMID: 3369360.
      View in: PubMed
    47. Eisenberg BR, Dix DJ, Kennedy JM. Physiological factors influencing the growth of skeletal muscle. Ciba Found Symp. 1988; 138:3-21. PMID: 3197515.
      View in: PubMed
    48. Wenderoth MP, Eisenberg BR. Incorporation of nascent myosin heavy chains into thick filaments of cardiac myocytes in thyroid-treated rabbits. J Cell Biol. 1987 Dec; 105(6 Pt 1):2771-80. PMID: 3320054; PMCID: PMC2114681.
    49. Cooper KE, Tang JM, Rae JL, Eisenberg RS. A cation channel in frog lens epithelia responsive to pressure and calcium. J Membr Biol. 1986; 93(3):259-69. PMID: 2434653.
      View in: PubMed
    50. Eisenberg BR, Eisenberg RS. The T-SR junction in contracting single skeletal muscle fibers. J Gen Physiol. 1982 Jan; 79(1):1-19. PMID: 7061983; PMCID: PMC2215487.
    51. Eisenberg BR, Gilai A. Structural changes in single muscle fibers after stimulation at a low frequency. J Gen Physiol. 1979 Jul; 74(1):1-16. PMID: 479818; PMCID: PMC2228485.
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