Dirk Gillespie to Computer Simulation
This is a "connection" page, showing publications Dirk Gillespie has written about Computer Simulation.
Connection Strength
2.623
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Simulating cardiac Ca2+ release units: effects of RyR cluster size and Ca2+ buffers on diastolic Ca2+ leak. Pflugers Arch. 2021 03; 473(3):435-446.
Score: 0.676
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Simulating diffusion from a cluster of point sources using propagation integrals. Eur Biophys J. 2020 Jul; 49(5):385-393.
Score: 0.643
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The effect of protein dielectric coefficient on the ionic selectivity of a calcium channel. J Chem Phys. 2006 Jul 21; 125(3):34901.
Score: 0.246
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The binding interactions that maintain excitation-contraction coupling junctions in skeletal muscle. J Gen Physiol. 2019 04 01; 151(4):593-605.
Score: 0.147
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Algorithm for the Time-Propagation of the Radial Diffusion Equation Based on a Gaussian Quadrature. PLoS One. 2015; 10(7):e0132273.
Score: 0.115
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Ion correlations in nanofluidic channels: effects of ion size, valence, and concentration on voltage- and pressure-driven currents. Langmuir. 2013 Jan 29; 29(4):1303-17.
Score: 0.096
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High energy conversion efficiency in nanofluidic channels. Nano Lett. 2012 Mar 14; 12(3):1410-6.
Score: 0.090
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A method for treating the passage of a charged hard sphere ion as it passes through a sharp dielectric boundary. J Chem Phys. 2011 Aug 14; 135(6):064105.
Score: 0.087
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Analyzing the components of the free-energy landscape in a calcium selective ion channel by Widom's particle insertion method. J Chem Phys. 2011 Feb 07; 134(5):055102.
Score: 0.084
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Synthetic nanopores as a test case for ion channel theories: the anomalous mole fraction effect without single filing. Biophys J. 2008 Jul; 95(2):609-19.
Score: 0.069
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Energetics of divalent selectivity in a calcium channel: the ryanodine receptor case study. Biophys J. 2008 Feb 15; 94(4):1169-84.
Score: 0.067
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Steric selectivity in Na channels arising from protein polarization and mobile side chains. Biophys J. 2007 Sep 15; 93(6):1960-80.
Score: 0.065
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Combined effect of pore radius and protein dielectric coefficient on the selectivity of a calcium channel. Phys Rev Lett. 2007 Apr 20; 98(16):168102.
Score: 0.065
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Physical descriptions of experimental selectivity measurements in ion channels. Eur Biophys J. 2002 Oct; 31(6):454-66.
Score: 0.047
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Comparison of three-dimensional poisson solution methods for particle-based simulation and inhomogeneous dielectrics. Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Jul; 86(1 Pt 1):011912.
Score: 0.023
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Ionic selectivity in L-type calcium channels by electrostatics and hard-core repulsion. J Gen Physiol. 2009 May; 133(5):497-509.
Score: 0.019
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Ions and inhibitors in the binding site of HIV protease: comparison of Monte Carlo simulations and the linearized Poisson-Boltzmann theory. Biophys J. 2009 Feb 18; 96(4):1293-306.
Score: 0.018
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Simulating prescribed particle densities in the grand canonical ensemble using iterative algorithms. J Chem Phys. 2008 Mar 28; 128(12):124102.
Score: 0.017
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Bubbles, gating, and anesthetics in ion channels. Biophys J. 2008 Jun; 94(11):4282-98.
Score: 0.017
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Ca2+ selectivity of a chemically modified OmpF with reduced pore volume. Biophys J. 2006 Dec 15; 91(12):4392-400.
Score: 0.016
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Relating microscopic charge movement to macroscopic currents: the Ramo-Shockley theorem applied to ion channels. Biophys J. 2004 Dec; 87(6):3716-22.
Score: 0.014