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Joao Mamede

TitleAssociate Professor
InstitutionRush University, Rush Medical College
DepartmentMicrobial Pathogens and Immunity
AddressChicago IL 60612
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    My Scopus ID is 51161695000

    Research Areas: HIV, lentiviruses, innate immunity.

    My Faculty Profile at Rush University Medical Center:
    https://www.rushu.rush.edu/faculty/jo%C3%A3o-mamede-phd

    My Laboratory:
    https://www.rushu.rush.edu/research/departmental-research/microbial-pathogens-and-immunity-research/laboratory-jo%C3%A3o-mamede-phd

    My NCBI Bibliography:
    https://www.ncbi.nlm.nih.gov/myncbi/joao%20filipe.inacio%20mamede.1/bibliography/public/

    My Scopus:
    https://www.scopus.com/authid/detail.uri?authorId=51161695000

    Education:
    PhD, Molecular Biology and Virology, University of Montpellier 1, France
    BS, Biochemistry, University of Coimbra, Portugal

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
    Newest   |   Oldest   |   Most Cited   |   Most Discussed   |   Timeline   |   Field Summary   |   Plain Text
    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Mendes A, Saraiva BM, Jacquemet G, Mamede JI, Leterrier C, Henriques R. Structural Repetition Detector for multi-scale quantitative mapping of molecular complexes through microscopy. Nat Commun. 2025 Jul 01; 16(1):5767. PMID: 40593540; PMCID: PMC12219329.
      Citations:    
    2. Siddique MA, McRaven MD, Arif MS, Allen EJ, McKee C, Honne S, Sultana T, Kim B, Carias AM, Mamede JI, Hope TJ. Blockade of de novo dNTP biosynthesis pathway delays HIV-1 early life cycle kinetics and dynamics. mBio. 2025 Jun 30; e0104725. PMID: 40586616.
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    3. Mendes A, Saraiva BM, Jacquemet G, Mamede JI, Leterrier C, Henriques R. Structural Repetition Detector: multi-scale quantitative mapping of molecular complexes through microscopy. Res Sq. 2024 Oct 15. PMID: 39483878; PMCID: PMC11527150.
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    4. Narasipura SD, Zayas JP, Ash MK, Reyes A, Shull T, Gambut S, Schneider JR, Lorenzo-Redondo R, Al-Harthi L, Mamede JI. HIV-1 infection promotes neuroinflammation and neuron pathogenesis in novel microglia-containing cerebral organoids. bioRxiv. 2024 Jun 20. PMID: 38915632; PMCID: PMC11195220.
      Citations:    
    5. Gambut S, Hope TJ, Mamede JI. Infectious Virus Tracking by Fluorescent Live Cell Imaging in Primary Cells. Methods Mol Biol. 2024; 2807:3-14. PMID: 38743217.
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    6. Ash MK, Bhimalli PP, Cho BK, Mattamana BB, Gambut S, Tarhoni I, Fhied CL, Reyes AF, Welninski SJ, Arivalagan J, Negr?o F, Goel R, Beck TL, Hope TJ, Sha BE, Goo YA, Al-Harthi L, Mamede JI, Borgia JA, Kelleher NL, Schneider JR, Ash MK, Bhimalli PP, Cho BK, Mattamana BB, Gambut S, Tarhoni I, Fhied CL, Reyes AF, Welninski SJ, Arivalagan J, Negr?o F, Goel R, Beck TL, Hope TJ, Sha BE, Goo YA, Al-Harthi L, Mamede JI, Borgia JA, Kelleher NL, Schneider JR. Bulk IgG glycosylation predicts COVID-19 severity and vaccine antibody response. Cell Rep. 2022 12 13; 41(11):111799. PMID: 36493786; PMCID: PMC9678812.
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    7. Forsyth CB, Zhang L, Bhushan A, Swanson B, Zhang L, Mamede JI, Voigt RM, Shaikh M, Engen PA, Keshavarzian A, Forsyth CB, Zhang L, Bhushan A, Swanson B, Zhang L, Mamede JI, Voigt RM, Shaikh M, Engen PA, Keshavarzian A. The SARS-CoV-2 S1 Spike Protein Promotes MAPK and NF-kB Activation in Human Lung Cells and Inflammatory Cytokine Production in Human Lung and Intestinal Epithelial Cells. Microorganisms. 2022 Oct 10; 10(10). PMID: 36296272; PMCID: PMC9607240.
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    8. Simons LM, Ozer EA, Gambut S, Dean TJ, Zhang L, Bhimalli P, Schneider JR, Mamede JI, Ison MG, Karmali R, Gordon LI, Lorenzo-Redondo R, Hultquist JF, Simons LM, Ozer EA, Gambut S, Dean TJ, Zhang L, Bhimalli P, Schneider JR, Mamede JI, Ison MG, Karmali R, Gordon LI, Lorenzo-Redondo R, Hultquist JF. De novo emergence of SARS-CoV-2 spike mutations in immunosuppressed patients. Transpl Infect Dis. 2022 Dec; 24(6):e13914. PMID: 35899968; PMCID: PMC9353292.
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    9. Yoh SM, Mamede JI, Lau D, Ahn N, Sánchez-Aparicio MT, Temple J, Tuckwell A, Fuchs NV, Cianci GC, Riva L, Curry H, Yin X, Gambut S, Simons LM, Hultquist JF, König R, Xiong Y, García-Sastre A, Böcking T, Hope TJ, Chanda SK. Recognition of HIV-1 capsid by PQBP1 licenses an innate immune sensing of nascent HIV-1 DNA. Mol Cell. 2022 Aug 04; 82(15):2871-2884.e6. PMID: 35809572; PMCID: PMC9552964.
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    10. Zayas JP, Mamede JI. HIV Infection and Spread between Th17 Cells. Viruses. 2022 Feb 16; 14(2). PMID: 35215997; PMCID: PMC8874668.
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    11. Ozer EA, Simons LM, Adewumi OM, Fowotade AA, Omoruyi EC, Adeniji JA, Olayinka OA, Dean TJ, Zayas J, Bhimalli PP, Ash MK, Maiga AI, Somboro AM, Maiga M, Godzik A, Schneider JR, Mamede JI, Taiwo BO, Hultquist JF, Lorenzo-Redondo R, Ozer EA, Simons LM, Adewumi OM, Fowotade AA, Omoruyi EC, Adeniji JA, Olayinka OA, Dean TJ, Zayas J, Bhimalli PP, Ash MK, Maiga AI, Somboro AM, Maiga M, Godzik A, Schneider JR, Mamede JI, Taiwo BO, Hultquist JF, Lorenzo-Redondo R. Multiple expansions of globally uncommon SARS-CoV-2 lineages in Nigeria. Nat Commun. 2022 02 03; 13(1):688. PMID: 35115515; PMCID: PMC8813984.
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    12. Sultana T, Mamede JI, Saito A, Ode H, Nohata K, Cohen R, Nakayama EE, Iwatani Y, Yamashita M, Hope TJ, Shioda T. Multiple Pathways To Avoid Beta Interferon Sensitivity of HIV-1 by Mutations in Capsid. J Virol. 2019 12 01; 93(23). PMID: 31511380.
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    13. Carter SD, Mageswaran SK, Farino ZJ, Mamede JI, Oikonomou CM, Hope TJ, Freyberg Z, Jensen GJ. Distinguishing signal from autofluorescence in cryogenic correlated light and electron microscopy of mammalian cells. J Struct Biol. 2018 01; 201(1):15-25. PMID: 29078993.
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    14. Sharma AI, Olson CL, Mamede JI, Gazos-Lopes F, Epting CL, Almeida IC, Engman DM. Sterol targeting drugs reveal life cycle stage-specific differences in trypanosome lipid rafts. Sci Rep. 2017 08 22; 7(1):9105. PMID: 28831063.
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    15. Mamede JI, Cianci GC, Anderson MR, Hope TJ. Early cytoplasmic uncoating is associated with infectivity of HIV-1. Proc Natl Acad Sci U S A. 2017 08 22; 114(34):E7169-E7178. PMID: 28784755.
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    16. Mamede JI, Damond F, Bernardo A, Matheron S, Descamps D, Battini JL, Sitbon M, Courgnaud V. Cyclophilins and nucleoporins are required for infection mediated by capsids from circulating HIV-2 primary isolates. Sci Rep. 2017 03 27; 7:45214. PMID: 28345672.
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    17. Dharan A, Talley S, Tripathi A, Mamede JI, Majetschak M, Hope TJ, Campbell EM. KIF5B and Nup358 Cooperatively Mediate the Nuclear Import of HIV-1 during Infection. PLoS Pathog. 2016 06; 12(6):e1005700. PMID: 27327622.
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    18. Mamede JI, Hope TJ. Detection and Tracking of Dual-Labeled HIV Particles Using Wide-Field Live Cell Imaging to Follow Viral Core Integrity. Methods Mol Biol. 2016; 1354:49-59. PMID: 26714704.
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    19. Wong RW, Mamede JI, Hope TJ. Impact of Nucleoporin-Mediated Chromatin Localization and Nuclear Architecture on HIV Integration Site Selection. J Virol. 2015 Oct; 89(19):9702-5. PMID: 26136574.
      Citations:    
    20. Mamede JI, Sitbon M, Battini JL, Courgnaud V. Heterogeneous susceptibility of circulating SIV isolate capsids to HIV-interacting factors. Retrovirology. 2013 Jul 24; 10:77. PMID: 23883001.
      Citations:    
    21. Courgnaud V, Mamede JI. [Conservation of cyclophilin A interaction with the capsid of prehistoric lentiviruses]. Med Sci (Paris). 2011 Jun-Jul; 27(6-7):574-5. PMID: 21718636.
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